Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.18■□□□□ 0.5
NcanP55066 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NcanP55066 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NcanP55066 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.18■□□□□ 0.5
NcanP55066 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
NcanP55066 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NcanP55066 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
NcanP55066 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.18■□□□□ 0.5
NcanP55066 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.18■□□□□ 0.5
NcanP55066 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.18■□□□□ 0.5
NcanP55066 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NcanP55066 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NcanP55066 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NcanP55066 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NcanP55066 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NcanP55066 Notumos-201ENSMUST00000151998 2659 ntBASIC18.18■□□□□ 0.5
NcanP55066 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NcanP55066 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NcanP55066 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NcanP55066 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NcanP55066 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NcanP55066 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NcanP55066 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NcanP55066 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NcanP55066 Mir5126-201ENSMUST00000175513 77 ntBASIC18.17■□□□□ 0.5
NcanP55066 Gm27321-201ENSMUST00000185021 205 ntBASIC18.17■□□□□ 0.5
NcanP55066 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.17■□□□□ 0.5
NcanP55066 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NcanP55066 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NcanP55066 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NcanP55066 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NcanP55066 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NcanP55066 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NcanP55066 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NcanP55066 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NcanP55066 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.16■□□□□ 0.5
NcanP55066 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC18.16■□□□□ 0.5
NcanP55066 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.16■□□□□ 0.5
NcanP55066 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
NcanP55066 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NcanP55066 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.16■□□□□ 0.5
NcanP55066 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NcanP55066 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NcanP55066 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NcanP55066 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NcanP55066 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.15■□□□□ 0.5
NcanP55066 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NcanP55066 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NcanP55066 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.15■□□□□ 0.5
NcanP55066 Gm14822-201ENSMUST00000122247 291 ntBASIC18.15■□□□□ 0.5
NcanP55066 Gm26308-201ENSMUST00000157768 69 ntBASIC18.15■□□□□ 0.5
NcanP55066 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.15■□□□□ 0.5
NcanP55066 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.15■□□□□ 0.5
NcanP55066 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NcanP55066 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NcanP55066 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NcanP55066 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NcanP55066 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NcanP55066 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NcanP55066 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.15■□□□□ 0.5
NcanP55066 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NcanP55066 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.14■□□□□ 0.5
NcanP55066 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NcanP55066 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NcanP55066 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NcanP55066 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NcanP55066 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.14■□□□□ 0.49
NcanP55066 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NcanP55066 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NcanP55066 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NcanP55066 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NcanP55066 Gm13186-201ENSMUST00000118031 316 ntBASIC18.14■□□□□ 0.49
NcanP55066 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NcanP55066 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
NcanP55066 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.14■□□□□ 0.49
NcanP55066 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
NcanP55066 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NcanP55066 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NcanP55066 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NcanP55066 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NcanP55066 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NcanP55066 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
NcanP55066 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NcanP55066 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NcanP55066 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NcanP55066 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms