Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.58■□□□□ 0.4
Sox1P53783 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.58■□□□□ 0.4
Sox1P53783 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.58■□□□□ 0.4
Sox1P53783 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.58■□□□□ 0.4
Sox1P53783 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Sox1P53783 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.58■□□□□ 0.4
Sox1P53783 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.58■□□□□ 0.4
Sox1P53783 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.58■□□□□ 0.4
Sox1P53783 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Sox1P53783 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 Golph3-202ENSMUST00000226517 2359 ntBASIC17.58■□□□□ 0.4
Sox1P53783 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox1P53783 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sox1P53783 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox1P53783 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox1P53783 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox1P53783 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox1P53783 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox1P53783 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox1P53783 Gm27867-201ENSMUST00000184778 125 ntBASIC17.57■□□□□ 0.4
Sox1P53783 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.57■□□□□ 0.4
Sox1P53783 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox1P53783 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox1P53783 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Sox1P53783 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox1P53783 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox1P53783 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sox1P53783 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sox1P53783 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox1P53783 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox1P53783 Gm25911-201ENSMUST00000157621 56 ntBASIC17.56■□□□□ 0.4
Sox1P53783 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox1P53783 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sox1P53783 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.55■□□□□ 0.4
Sox1P53783 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.55■□□□□ 0.4
Sox1P53783 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sox1P53783 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.55■□□□□ 0.4
Sox1P53783 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox1P53783 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Sox1P53783 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.55■□□□□ 0.4
Sox1P53783 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sox1P53783 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox1P53783 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.55■□□□□ 0.4
Sox1P53783 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sox1P53783 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox1P53783 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sox1P53783 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox1P53783 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sox1P53783 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.55■□□□□ 0.4
Sox1P53783 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox1P53783 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox1P53783 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox1P53783 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.54■□□□□ 0.4
Sox1P53783 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.54■□□□□ 0.4
Sox1P53783 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sox1P53783 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox1P53783 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox1P53783 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.53■□□□□ 0.4
Sox1P53783 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.53■□□□□ 0.4
Sox1P53783 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox1P53783 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.53■□□□□ 0.4
Sox1P53783 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox1P53783 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Sox1P53783 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.53■□□□□ 0.4
Sox1P53783 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.53■□□□□ 0.4
Sox1P53783 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms