Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Cux1P53564 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Cux1P53564 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC26.48■■□□□ 1.83
Cux1P53564 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Cux1P53564 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cux1P53564 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Cux1P53564 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC26.48■■□□□ 1.83
Cux1P53564 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cux1P53564 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC26.48■■□□□ 1.83
Cux1P53564 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cux1P53564 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC26.47■■□□□ 1.83
Cux1P53564 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cux1P53564 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cux1P53564 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Cux1P53564 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Cux1P53564 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cux1P53564 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cux1P53564 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cux1P53564 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC26.46■■□□□ 1.83
Cux1P53564 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cux1P53564 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC26.46■■□□□ 1.83
Cux1P53564 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cux1P53564 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC26.46■■□□□ 1.83
Cux1P53564 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Cux1P53564 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Cux1P53564 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cux1P53564 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Cux1P53564 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Cux1P53564 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Cux1P53564 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cux1P53564 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Cux1P53564 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Cux1P53564 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Cux1P53564 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Cux1P53564 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Cux1P53564 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cux1P53564 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Cux1P53564 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cux1P53564 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Cux1P53564 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Cux1P53564 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC26.44■■□□□ 1.82
Cux1P53564 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cux1P53564 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cux1P53564 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cux1P53564 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Cux1P53564 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC26.44■■□□□ 1.82
Cux1P53564 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC26.44■■□□□ 1.82
Cux1P53564 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cux1P53564 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cux1P53564 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cux1P53564 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Cux1P53564 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
Cux1P53564 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC26.43■■□□□ 1.82
Cux1P53564 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cux1P53564 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cux1P53564 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Cux1P53564 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cux1P53564 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Cux1P53564 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cux1P53564 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cux1P53564 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC26.42■■□□□ 1.82
Cux1P53564 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC26.42■■□□□ 1.82
Cux1P53564 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cux1P53564 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC26.42■■□□□ 1.82
Cux1P53564 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cux1P53564 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cux1P53564 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cux1P53564 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cux1P53564 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC26.41■■□□□ 1.82
Cux1P53564 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cux1P53564 Gm43514-201ENSMUST00000198852 424 ntBASIC26.41■■□□□ 1.82
Cux1P53564 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Cux1P53564 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cux1P53564 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Cux1P53564 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC26.41■■□□□ 1.82
Cux1P53564 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Cux1P53564 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Cux1P53564 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cux1P53564 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cux1P53564 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Cux1P53564 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Cux1P53564 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
Cux1P53564 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Cux1P53564 Gm44357-201ENSMUST00000195897 142 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Gm19658-201ENSMUST00000196231 138 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Gm44367-201ENSMUST00000196836 138 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Gm44350-201ENSMUST00000197197 138 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Gm44390-201ENSMUST00000197533 144 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Gm44313-201ENSMUST00000198018 138 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Gm44486-201ENSMUST00000198508 138 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Gm44454-201ENSMUST00000198541 138 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Gm44314-201ENSMUST00000199263 138 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Gm44394-201ENSMUST00000199558 138 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Gm44484-201ENSMUST00000199873 138 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Gm44466-201ENSMUST00000200264 138 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Gm44359-201ENSMUST00000200671 138 ntBASIC26.4■■□□□ 1.82
Cux1P53564 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC26.4■■□□□ 1.82
Cux1P53564 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Cux1P53564 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cux1P53564 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC26.39■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms