Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 Gm11643-201ENSMUST00000119578 864 ntBASIC15.96■□□□□ 0.15
Ccr4P51680 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.96■□□□□ 0.15
Ccr4P51680 Gm18666-201ENSMUST00000190039 958 ntBASIC15.96■□□□□ 0.15
Ccr4P51680 Gm37856-201ENSMUST00000191634 999 ntBASIC15.96■□□□□ 0.15
Ccr4P51680 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccr4P51680 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ccr4P51680 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Ccr4P51680 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.95■□□□□ 0.14
Ccr4P51680 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.95■□□□□ 0.14
Ccr4P51680 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.95■□□□□ 0.14
Ccr4P51680 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccr4P51680 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ccr4P51680 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.94■□□□□ 0.14
Ccr4P51680 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.94■□□□□ 0.14
Ccr4P51680 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Ccr4P51680 Gm12527-201ENSMUST00000117967 564 ntBASIC15.94■□□□□ 0.14
Ccr4P51680 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Gm6576-201ENSMUST00000169678 883 ntBASIC15.94■□□□□ 0.14
Ccr4P51680 Gm42545-201ENSMUST00000202755 922 ntBASIC15.94■□□□□ 0.14
Ccr4P51680 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ccr4P51680 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.94■□□□□ 0.14
Ccr4P51680 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.94■□□□□ 0.14
Ccr4P51680 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.94■□□□□ 0.14
Ccr4P51680 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccr4P51680 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.94■□□□□ 0.14
Ccr4P51680 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.94■□□□□ 0.14
Ccr4P51680 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccr4P51680 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccr4P51680 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccr4P51680 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccr4P51680 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.93■□□□□ 0.14
Ccr4P51680 Gm12382-201ENSMUST00000122005 922 ntBASIC15.93■□□□□ 0.14
Ccr4P51680 Mir8112-201ENSMUST00000184382 131 ntBASIC15.93■□□□□ 0.14
Ccr4P51680 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.93■□□□□ 0.14
Ccr4P51680 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.93■□□□□ 0.14
Ccr4P51680 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.93■□□□□ 0.14
Ccr4P51680 Gm18025-201ENSMUST00000221733 862 ntBASIC15.93■□□□□ 0.14
Ccr4P51680 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccr4P51680 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccr4P51680 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccr4P51680 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ccr4P51680 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ccr4P51680 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.92■□□□□ 0.14
Ccr4P51680 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ccr4P51680 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.92■□□□□ 0.14
Ccr4P51680 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ccr4P51680 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.92■□□□□ 0.14
Ccr4P51680 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms