Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.44■□□□□ 0.7
Atoh1P48985 Gm27000-201ENSMUST00000182943 842 ntBASIC19.44■□□□□ 0.7
Atoh1P48985 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.44■□□□□ 0.7
Atoh1P48985 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.44■□□□□ 0.7
Atoh1P48985 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atoh1P48985 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atoh1P48985 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atoh1P48985 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atoh1P48985 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.43■□□□□ 0.7
Atoh1P48985 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.43■□□□□ 0.7
Atoh1P48985 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atoh1P48985 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Atoh1P48985 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Atoh1P48985 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atoh1P48985 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atoh1P48985 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Atoh1P48985 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atoh1P48985 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atoh1P48985 Phf7-203ENSMUST00000226565 1971 ntBASIC19.43■□□□□ 0.7
Atoh1P48985 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Atoh1P48985 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Atoh1P48985 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.42■□□□□ 0.7
Atoh1P48985 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Atoh1P48985 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.42■□□□□ 0.7
Atoh1P48985 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Atoh1P48985 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.42■□□□□ 0.7
Atoh1P48985 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Atoh1P48985 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atoh1P48985 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atoh1P48985 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.41■□□□□ 0.7
Atoh1P48985 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Atoh1P48985 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.41■□□□□ 0.7
Atoh1P48985 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.41■□□□□ 0.7
Atoh1P48985 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Atoh1P48985 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Atoh1P48985 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Atoh1P48985 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
Atoh1P48985 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atoh1P48985 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atoh1P48985 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atoh1P48985 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.4■□□□□ 0.7
Atoh1P48985 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atoh1P48985 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atoh1P48985 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Atoh1P48985 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.4■□□□□ 0.7
Atoh1P48985 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Atoh1P48985 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.4■□□□□ 0.7
Atoh1P48985 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Atoh1P48985 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atoh1P48985 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atoh1P48985 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atoh1P48985 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atoh1P48985 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Atoh1P48985 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atoh1P48985 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atoh1P48985 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atoh1P48985 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atoh1P48985 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atoh1P48985 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Atoh1P48985 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atoh1P48985 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms