Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Msh2P43247 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Msh2P43247 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Msh2P43247 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.73■□□□□ 0.43
Msh2P43247 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh2P43247 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.72■□□□□ 0.43
Msh2P43247 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Msh2P43247 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Msh2P43247 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Msh2P43247 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Msh2P43247 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.72■□□□□ 0.43
Msh2P43247 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.72■□□□□ 0.43
Msh2P43247 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Msh2P43247 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Msh2P43247 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Msh2P43247 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 Gm38285-201ENSMUST00000192928 922 ntBASIC17.72■□□□□ 0.43
Msh2P43247 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.72■□□□□ 0.43
Msh2P43247 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Msh2P43247 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Msh2P43247 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Msh2P43247 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Gm20760-201ENSMUST00000179197 648 ntBASIC17.71■□□□□ 0.43
Msh2P43247 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.71■□□□□ 0.43
Msh2P43247 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.71■□□□□ 0.43
Msh2P43247 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.71■□□□□ 0.43
Msh2P43247 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.71■□□□□ 0.43
Msh2P43247 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Msh2P43247 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Msh2P43247 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Msh2P43247 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Msh2P43247 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.7■□□□□ 0.42
Msh2P43247 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Msh2P43247 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Msh2P43247 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msh2P43247 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Msh2P43247 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msh2P43247 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msh2P43247 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Msh2P43247 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msh2P43247 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Msh2P43247 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Msh2P43247 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.69■□□□□ 0.42
Msh2P43247 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msh2P43247 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msh2P43247 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msh2P43247 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Msh2P43247 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms