Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Gm10033-202ENSMUST00000211874 928 ntBASIC14.47□□□□□ -0.09
Mmp9P41245 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp9P41245 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp9P41245 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp9P41245 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Mmp9P41245 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Mmp9P41245 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp9P41245 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp9P41245 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Mmp9P41245 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp9P41245 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp9P41245 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Mmp9P41245 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp9P41245 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp9P41245 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp9P41245 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp9P41245 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Mmp9P41245 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp9P41245 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Mmp9P41245 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.46□□□□□ -0.09
Mmp9P41245 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.46□□□□□ -0.09
Mmp9P41245 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.46□□□□□ -0.09
Mmp9P41245 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp9P41245 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp9P41245 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp9P41245 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp9P41245 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp9P41245 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Mmp9P41245 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
Mmp9P41245 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Mmp9P41245 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Mmp9P41245 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Mmp9P41245 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Mmp9P41245 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp9P41245 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Mmp9P41245 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Mmp9P41245 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Mmp9P41245 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp9P41245 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Mmp9P41245 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.45□□□□□ -0.1
Mmp9P41245 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Mmp9P41245 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp9P41245 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.45□□□□□ -0.1
Mmp9P41245 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Mmp9P41245 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.45□□□□□ -0.1
Mmp9P41245 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp9P41245 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp9P41245 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.45□□□□□ -0.1
Mmp9P41245 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp9P41245 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp9P41245 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp9P41245 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Mmp9P41245 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.45□□□□□ -0.1
Mmp9P41245 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Mmp9P41245 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp9P41245 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.44□□□□□ -0.1
Mmp9P41245 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Mmp9P41245 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.44□□□□□ -0.1
Mmp9P41245 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Mmp9P41245 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Mmp9P41245 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Mmp9P41245 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.44□□□□□ -0.1
Mmp9P41245 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.44□□□□□ -0.1
Mmp9P41245 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.44□□□□□ -0.1
Mmp9P41245 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.44□□□□□ -0.1
Mmp9P41245 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Gm22325-201ENSMUST00000158904 308 ntBASIC14.44□□□□□ -0.1
Mmp9P41245 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.44□□□□□ -0.1
Mmp9P41245 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.44□□□□□ -0.1
Mmp9P41245 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Mmp9P41245 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp9P41245 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp9P41245 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Mmp9P41245 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.43□□□□□ -0.1
Mmp9P41245 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp9P41245 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp9P41245 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp9P41245 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Mmp9P41245 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp9P41245 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Mmp9P41245 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp9P41245 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Mmp9P41245 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp9P41245 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms