Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sox6P40645 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.18■□□□□ 0.18
Sox6P40645 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.18■□□□□ 0.18
Sox6P40645 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sox6P40645 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox6P40645 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sox6P40645 Flg-201ENSMUST00000050758 1488 ntBASIC16.17■□□□□ 0.18
Sox6P40645 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.17■□□□□ 0.18
Sox6P40645 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox6P40645 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.17■□□□□ 0.18
Sox6P40645 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox6P40645 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Sox6P40645 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Sox6P40645 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox6P40645 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.17■□□□□ 0.18
Sox6P40645 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.17■□□□□ 0.18
Sox6P40645 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox6P40645 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.17■□□□□ 0.18
Sox6P40645 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.17■□□□□ 0.18
Sox6P40645 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox6P40645 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox6P40645 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox6P40645 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sox6P40645 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox6P40645 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox6P40645 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Sox6P40645 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sox6P40645 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sox6P40645 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Haglr-201ENSMUST00000100000 2085 ntBASIC16.16■□□□□ 0.18
Sox6P40645 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Sox6P40645 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.16■□□□□ 0.18
Sox6P40645 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Sox6P40645 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sox6P40645 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox6P40645 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox6P40645 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox6P40645 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox6P40645 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox6P40645 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox6P40645 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox6P40645 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.15■□□□□ 0.18
Sox6P40645 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox6P40645 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.15■□□□□ 0.18
Sox6P40645 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.15■□□□□ 0.18
Sox6P40645 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox6P40645 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox6P40645 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox6P40645 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox6P40645 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox6P40645 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox6P40645 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox6P40645 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Sox6P40645 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sox6P40645 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox6P40645 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sox6P40645 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sox6P40645 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sox6P40645 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox6P40645 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.14■□□□□ 0.17
Sox6P40645 Gm12896-201ENSMUST00000118430 226 ntBASIC16.14■□□□□ 0.17
Sox6P40645 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.14■□□□□ 0.17
Sox6P40645 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.14■□□□□ 0.17
Sox6P40645 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.14■□□□□ 0.17
Sox6P40645 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sox6P40645 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox6P40645 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox6P40645 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox6P40645 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.14■□□□□ 0.17
Sox6P40645 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sox6P40645 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox6P40645 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox6P40645 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox6P40645 Tgds-204ENSMUST00000228543 1594 ntBASIC16.13■□□□□ 0.17
Sox6P40645 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox6P40645 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms