Protein–RNA interactions for Protein: P29452

Casp1, Caspase-1, mousemouse

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp1P29452 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.68■□□□□ 0.9
Casp1P29452 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.68■□□□□ 0.9
Casp1P29452 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 Gm37722-201ENSMUST00000193757 208 ntBASIC20.68■□□□□ 0.9
Casp1P29452 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.68■□□□□ 0.9
Casp1P29452 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.68■□□□□ 0.9
Casp1P29452 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Casp1P29452 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.68■□□□□ 0.9
Casp1P29452 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.68■□□□□ 0.9
Casp1P29452 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Casp1P29452 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 Mir770-201ENSMUST00000103252 94 ntBASIC20.67■□□□□ 0.9
Casp1P29452 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.67■□□□□ 0.9
Casp1P29452 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.67■□□□□ 0.9
Casp1P29452 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.67■□□□□ 0.9
Casp1P29452 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.67■□□□□ 0.9
Casp1P29452 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Casp1P29452 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Casp1P29452 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Casp1P29452 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casp1P29452 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Casp1P29452 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casp1P29452 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Casp1P29452 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casp1P29452 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Casp1P29452 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casp1P29452 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casp1P29452 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casp1P29452 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casp1P29452 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Casp1P29452 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casp1P29452 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casp1P29452 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.65■□□□□ 0.9
Casp1P29452 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casp1P29452 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.65■□□□□ 0.9
Casp1P29452 Gm6623-201ENSMUST00000173570 544 ntBASIC20.65■□□□□ 0.9
Casp1P29452 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Casp1P29452 Gm17807-201ENSMUST00000186869 298 ntBASIC20.65■□□□□ 0.9
Casp1P29452 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casp1P29452 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casp1P29452 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casp1P29452 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Casp1P29452 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casp1P29452 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casp1P29452 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Casp1P29452 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Casp1P29452 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casp1P29452 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Casp1P29452 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.64■□□□□ 0.89
Casp1P29452 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casp1P29452 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casp1P29452 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casp1P29452 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.64■□□□□ 0.89
Casp1P29452 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casp1P29452 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Casp1P29452 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casp1P29452 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.64■□□□□ 0.89
Casp1P29452 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Casp1P29452 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casp1P29452 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Casp1P29452 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casp1P29452 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casp1P29452 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.63■□□□□ 0.89
Casp1P29452 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Casp1P29452 Gm28033-201ENSMUST00000184224 96 ntBASIC20.63■□□□□ 0.89
Casp1P29452 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.63■□□□□ 0.89
Casp1P29452 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.63■□□□□ 0.89
Casp1P29452 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casp1P29452 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casp1P29452 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casp1P29452 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Casp1P29452 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Casp1P29452 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casp1P29452 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casp1P29452 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casp1P29452 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casp1P29452 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Casp1P29452 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms