Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nckap1P28660 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nckap1P28660 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nckap1P28660 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.13■□□□□ 0.33
Nckap1P28660 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nckap1P28660 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.13■□□□□ 0.33
Nckap1P28660 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.13■□□□□ 0.33
Nckap1P28660 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nckap1P28660 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nckap1P28660 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nckap1P28660 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.12■□□□□ 0.33
Nckap1P28660 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nckap1P28660 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nckap1P28660 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nckap1P28660 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.12■□□□□ 0.33
Nckap1P28660 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nckap1P28660 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nckap1P28660 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Nckap1P28660 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Nckap1P28660 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.11■□□□□ 0.33
Nckap1P28660 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.11■□□□□ 0.33
Nckap1P28660 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nckap1P28660 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.11■□□□□ 0.33
Nckap1P28660 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nckap1P28660 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.11■□□□□ 0.33
Nckap1P28660 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nckap1P28660 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nckap1P28660 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1P28660 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1P28660 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1P28660 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1P28660 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1P28660 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1P28660 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.1■□□□□ 0.33
Nckap1P28660 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nckap1P28660 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1P28660 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.1■□□□□ 0.33
Nckap1P28660 Gm9013-201ENSMUST00000132939 882 ntBASIC17.1■□□□□ 0.33
Nckap1P28660 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1P28660 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nckap1P28660 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1P28660 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Nckap1P28660 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1P28660 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1P28660 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.1■□□□□ 0.33
Nckap1P28660 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Nckap1P28660 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nckap1P28660 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.09■□□□□ 0.33
Nckap1P28660 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1P28660 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1P28660 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1P28660 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nckap1P28660 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms