Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6aP27664 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6aP27664 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6aP27664 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6aP27664 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6aP27664 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6aP27664 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Pde6aP27664 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.95■□□□□ 0.78
Pde6aP27664 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.95■□□□□ 0.78
Pde6aP27664 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.95■□□□□ 0.78
Pde6aP27664 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6aP27664 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.95■□□□□ 0.78
Pde6aP27664 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.95■□□□□ 0.78
Pde6aP27664 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Pde6aP27664 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6aP27664 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6aP27664 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6aP27664 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Pde6aP27664 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Pde6aP27664 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Pde6aP27664 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Pde6aP27664 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Pde6aP27664 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.94■□□□□ 0.78
Pde6aP27664 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6aP27664 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6aP27664 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6aP27664 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6aP27664 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Pde6aP27664 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6aP27664 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6aP27664 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6aP27664 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6aP27664 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.93■□□□□ 0.78
Pde6aP27664 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.93■□□□□ 0.78
Pde6aP27664 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6aP27664 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6aP27664 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6aP27664 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6aP27664 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.93■□□□□ 0.78
Pde6aP27664 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Pde6aP27664 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6aP27664 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.92■□□□□ 0.78
Pde6aP27664 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Pde6aP27664 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6aP27664 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6aP27664 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.92■□□□□ 0.78
Pde6aP27664 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.92■□□□□ 0.78
Pde6aP27664 Gm7889-201ENSMUST00000185591 958 ntBASIC19.92■□□□□ 0.78
Pde6aP27664 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6aP27664 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6aP27664 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6aP27664 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pde6aP27664 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6aP27664 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6aP27664 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6aP27664 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6aP27664 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6aP27664 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6aP27664 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Pde6aP27664 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.91■□□□□ 0.78
Pde6aP27664 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Pde6aP27664 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6aP27664 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Pde6aP27664 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6aP27664 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms