Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Cd40lgP27548 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd40lgP27548 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd40lgP27548 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.85■□□□□ 0.13
Cd40lgP27548 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cd40lgP27548 Gm37292-201ENSMUST00000192062 758 ntBASIC15.85■□□□□ 0.13
Cd40lgP27548 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.85■□□□□ 0.13
Cd40lgP27548 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd40lgP27548 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cd40lgP27548 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd40lgP27548 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd40lgP27548 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd40lgP27548 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cd40lgP27548 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cd40lgP27548 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd40lgP27548 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cd40lgP27548 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cd40lgP27548 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Cd40lgP27548 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.84■□□□□ 0.13
Cd40lgP27548 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.84■□□□□ 0.13
Cd40lgP27548 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.84■□□□□ 0.13
Cd40lgP27548 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.84■□□□□ 0.13
Cd40lgP27548 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.84■□□□□ 0.13
Cd40lgP27548 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.84■□□□□ 0.13
Cd40lgP27548 Gm10252-201ENSMUST00000209541 832 ntBASIC15.84■□□□□ 0.13
Cd40lgP27548 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Cd40lgP27548 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.84■□□□□ 0.13
Cd40lgP27548 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cd40lgP27548 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cd40lgP27548 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cd40lgP27548 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cd40lgP27548 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cd40lgP27548 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cd40lgP27548 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cd40lgP27548 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd40lgP27548 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd40lgP27548 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.83■□□□□ 0.12
Cd40lgP27548 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.83■□□□□ 0.12
Cd40lgP27548 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.83■□□□□ 0.12
Cd40lgP27548 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cd40lgP27548 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.83■□□□□ 0.12
Cd40lgP27548 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd40lgP27548 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.83■□□□□ 0.12
Cd40lgP27548 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd40lgP27548 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.83■□□□□ 0.12
Cd40lgP27548 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cd40lgP27548 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cd40lgP27548 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Cd40lgP27548 Gm715-201ENSMUST00000117865 831 ntBASIC15.82■□□□□ 0.12
Cd40lgP27548 Mir6982-201ENSMUST00000184354 68 ntBASIC15.82■□□□□ 0.12
Cd40lgP27548 Gm29791-202ENSMUST00000207888 369 ntBASIC15.82■□□□□ 0.12
Cd40lgP27548 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cd40lgP27548 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cd40lgP27548 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd40lgP27548 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cd40lgP27548 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40lgP27548 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40lgP27548 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Cd40lgP27548 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40lgP27548 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.81■□□□□ 0.12
Cd40lgP27548 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Cd40lgP27548 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cd40lgP27548 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40lgP27548 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40lgP27548 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40lgP27548 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40lgP27548 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40lgP27548 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40lgP27548 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40lgP27548 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cd40lgP27548 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.81■□□□□ 0.12
Cd40lgP27548 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.81■□□□□ 0.12
Cd40lgP27548 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd40lgP27548 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms