Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cd40P27512 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Cd40P27512 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.57■□□□□ 0.08
Cd40P27512 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Cd40P27512 Gm27463-201ENSMUST00000183569 57 ntBASIC15.57■□□□□ 0.08
Cd40P27512 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.57■□□□□ 0.08
Cd40P27512 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Gm5417-201ENSMUST00000079706 384 ntBASIC15.57■□□□□ 0.08
Cd40P27512 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cd40P27512 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cd40P27512 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.57■□□□□ 0.08
Cd40P27512 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Cd40P27512 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.56■□□□□ 0.08
Cd40P27512 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.56■□□□□ 0.08
Cd40P27512 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Cd40P27512 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cd40P27512 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Cd40P27512 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cd40P27512 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cd40P27512 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.55■□□□□ 0.08
Cd40P27512 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.55■□□□□ 0.08
Cd40P27512 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.55■□□□□ 0.08
Cd40P27512 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.55■□□□□ 0.08
Cd40P27512 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cd40P27512 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cd40P27512 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cd40P27512 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Cd40P27512 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cd40P27512 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cd40P27512 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cd40P27512 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.54■□□□□ 0.08
Cd40P27512 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Gm7791-201ENSMUST00000219066 539 ntBASIC15.54■□□□□ 0.08
Cd40P27512 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.54■□□□□ 0.08
Cd40P27512 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cd40P27512 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cd40P27512 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms