Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nfkb1P25799 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfkb1P25799 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfkb1P25799 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.69■□□□□ 0.42
Nfkb1P25799 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.69■□□□□ 0.42
Nfkb1P25799 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Nfkb1P25799 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nfkb1P25799 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfkb1P25799 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfkb1P25799 Gm6345-202ENSMUST00000180900 204 ntBASIC17.69■□□□□ 0.42
Nfkb1P25799 Gm21362-201ENSMUST00000194272 928 ntBASIC17.69■□□□□ 0.42
Nfkb1P25799 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.69■□□□□ 0.42
Nfkb1P25799 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfkb1P25799 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfkb1P25799 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nfkb1P25799 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.69■□□□□ 0.42
Nfkb1P25799 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nfkb1P25799 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfkb1P25799 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nfkb1P25799 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nfkb1P25799 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nfkb1P25799 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nfkb1P25799 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nfkb1P25799 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nfkb1P25799 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nfkb1P25799 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Nfkb1P25799 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nfkb1P25799 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.68■□□□□ 0.42
Nfkb1P25799 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nfkb1P25799 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.68■□□□□ 0.42
Nfkb1P25799 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nfkb1P25799 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.67■□□□□ 0.42
Nfkb1P25799 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.67■□□□□ 0.42
Nfkb1P25799 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Gm7367-201ENSMUST00000057611 492 ntBASIC17.67■□□□□ 0.42
Nfkb1P25799 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Nfkb1P25799 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.67■□□□□ 0.42
Nfkb1P25799 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Nfkb1P25799 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nfkb1P25799 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nfkb1P25799 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.66■□□□□ 0.42
Nfkb1P25799 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nfkb1P25799 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.66■□□□□ 0.42
Nfkb1P25799 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.66■□□□□ 0.42
Nfkb1P25799 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.66■□□□□ 0.42
Nfkb1P25799 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nfkb1P25799 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.66■□□□□ 0.42
Nfkb1P25799 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.66■□□□□ 0.42
Nfkb1P25799 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Nfkb1P25799 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.65■□□□□ 0.42
Nfkb1P25799 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nfkb1P25799 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Nfkb1P25799 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.65■□□□□ 0.42
Nfkb1P25799 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nfkb1P25799 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.65■□□□□ 0.42
Nfkb1P25799 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nfkb1P25799 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms