Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm3P21107 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.34■□□□□ 0.69
Tpm3P21107 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.34■□□□□ 0.69
Tpm3P21107 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Tpm3P21107 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm3P21107 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Tpm3P21107 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.34■□□□□ 0.69
Tpm3P21107 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm3P21107 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm3P21107 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm3P21107 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm3P21107 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm3P21107 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm3P21107 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Tpm3P21107 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpm3P21107 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpm3P21107 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpm3P21107 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpm3P21107 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.33■□□□□ 0.69
Tpm3P21107 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpm3P21107 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.33■□□□□ 0.69
Tpm3P21107 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tpm3P21107 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpm3P21107 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.33■□□□□ 0.68
Tpm3P21107 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm3P21107 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm3P21107 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.33■□□□□ 0.68
Tpm3P21107 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.33■□□□□ 0.68
Tpm3P21107 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm3P21107 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Tpm3P21107 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.33■□□□□ 0.68
Tpm3P21107 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.33■□□□□ 0.68
Tpm3P21107 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm3P21107 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm3P21107 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm3P21107 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.33■□□□□ 0.68
Tpm3P21107 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.33■□□□□ 0.68
Tpm3P21107 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm3P21107 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.32■□□□□ 0.68
Tpm3P21107 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Gm27454-201ENSMUST00000185090 204 ntBASIC19.32■□□□□ 0.68
Tpm3P21107 Gm43060-201ENSMUST00000200621 289 ntBASIC19.32■□□□□ 0.68
Tpm3P21107 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm3P21107 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.31■□□□□ 0.68
Tpm3P21107 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tpm3P21107 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tpm3P21107 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm3P21107 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.3■□□□□ 0.68
Tpm3P21107 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tpm3P21107 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm3P21107 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm3P21107 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm3P21107 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm3P21107 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm3P21107 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.3■□□□□ 0.68
Tpm3P21107 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm3P21107 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tpm3P21107 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm3P21107 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm3P21107 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm3P21107 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm3P21107 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Tpm3P21107 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm3P21107 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tpm3P21107 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm3P21107 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm3P21107 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm3P21107 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm3P21107 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm3P21107 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Tpm3P21107 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm3P21107 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm3P21107 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm3P21107 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms