Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxa4P06798 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxa4P06798 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxa4P06798 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Gm10231-201ENSMUST00000181584 441 ntBASIC16.91■□□□□ 0.3
Hoxa4P06798 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Gm10175-202ENSMUST00000208752 441 ntBASIC16.91■□□□□ 0.3
Hoxa4P06798 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.91■□□□□ 0.3
Hoxa4P06798 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Hoxa4P06798 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Hoxa4P06798 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hoxa4P06798 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxa4P06798 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hoxa4P06798 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Hoxa4P06798 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Hoxa4P06798 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxa4P06798 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Hoxa4P06798 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hoxa4P06798 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.89■□□□□ 0.29
Hoxa4P06798 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Hoxa4P06798 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.89■□□□□ 0.29
Hoxa4P06798 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.89■□□□□ 0.29
Hoxa4P06798 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hoxa4P06798 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hoxa4P06798 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 Mir1668-201ENSMUST00000184114 107 ntBASIC16.89■□□□□ 0.29
Hoxa4P06798 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Hoxa4P06798 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxa4P06798 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.89■□□□□ 0.29
Hoxa4P06798 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa4P06798 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa4P06798 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa4P06798 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa4P06798 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa4P06798 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa4P06798 Gm18958-201ENSMUST00000174258 762 ntBASIC16.88■□□□□ 0.29
Hoxa4P06798 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.88■□□□□ 0.29
Hoxa4P06798 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.88■□□□□ 0.29
Hoxa4P06798 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Hoxa4P06798 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa4P06798 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.88■□□□□ 0.29
Hoxa4P06798 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa4P06798 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa4P06798 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa4P06798 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa4P06798 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxa4P06798 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.88■□□□□ 0.29
Hoxa4P06798 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.87■□□□□ 0.29
Hoxa4P06798 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa4P06798 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa4P06798 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa4P06798 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa4P06798 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa4P06798 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa4P06798 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa4P06798 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa4P06798 Gm13836-201ENSMUST00000121159 501 ntBASIC16.87■□□□□ 0.29
Hoxa4P06798 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa4P06798 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa4P06798 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.87■□□□□ 0.29
Hoxa4P06798 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxa4P06798 Gm18032-201ENSMUST00000222541 538 ntBASIC16.87■□□□□ 0.29
Hoxa4P06798 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms