Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04940 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04940 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P04940 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04940 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04940 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.95□□□□□ -0.18
P04940 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
P04940 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04940 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04940 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.95□□□□□ -0.18
P04940 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.95□□□□□ -0.18
P04940 Gm7638-201ENSMUST00000121348 967 ntBASIC13.95□□□□□ -0.18
P04940 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.95□□□□□ -0.18
P04940 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.95□□□□□ -0.18
P04940 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.95□□□□□ -0.18
P04940 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04940 Il3ra-202ENSMUST00000223589 738 ntBASIC13.95□□□□□ -0.18
P04940 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04940 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
P04940 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04940 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
P04940 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
P04940 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
P04940 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
P04940 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04940 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
P04940 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04940 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.94□□□□□ -0.18
P04940 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.94□□□□□ -0.18
P04940 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P04940 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04940 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P04940 Gm10812-201ENSMUST00000099864 546 ntBASIC13.94□□□□□ -0.18
P04940 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04940 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04940 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.94□□□□□ -0.18
P04940 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04940 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P04940 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04940 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.93□□□□□ -0.18
P04940 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04940 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04940 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.93□□□□□ -0.18
P04940 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04940 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04940 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04940 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04940 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
P04940 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
P04940 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
P04940 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04940 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04940 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P04940 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
P04940 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
P04940 Gm21814-202ENSMUST00000203277 873 ntBASIC13.92□□□□□ -0.18
P04940 Gm3375-201ENSMUST00000203929 796 ntBASIC13.92□□□□□ -0.18
P04940 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.92□□□□□ -0.18
P04940 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.92□□□□□ -0.18
P04940 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.92□□□□□ -0.18
P04940 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P04940 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
P04940 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.91□□□□□ -0.18
P04940 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.91□□□□□ -0.18
P04940 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.91□□□□□ -0.18
P04940 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.91□□□□□ -0.18
P04940 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.91□□□□□ -0.18
P04940 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
P04940 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
P04940 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
P04940 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms