Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.2□□□□□ -0.46
Hbb-b1P02088 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hbb-b1P02088 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.2□□□□□ -0.46
Hbb-b1P02088 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.2□□□□□ -0.46
Hbb-b1P02088 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hbb-b1P02088 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Mir6538-201ENSMUST00000183713 110 ntBASIC12.18□□□□□ -0.46
Hbb-b1P02088 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Gm10232-201ENSMUST00000089221 720 ntBASIC12.18□□□□□ -0.46
Hbb-b1P02088 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hbb-b1P02088 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hbb-b1P02088 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms