Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sh2d1aO88890 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.19□□□□□ -0.46
Sh2d1aO88890 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh2d1aO88890 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.18□□□□□ -0.46
Sh2d1aO88890 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sh2d1aO88890 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.18□□□□□ -0.46
Sh2d1aO88890 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Sh2d1aO88890 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Gm11249-201ENSMUST00000117071 859 ntBASIC12.17□□□□□ -0.46
Sh2d1aO88890 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Dio3-201ENSMUST00000097228 1449 ntBASIC12.17□□□□□ -0.46
Sh2d1aO88890 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.17□□□□□ -0.46
Sh2d1aO88890 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh2d1aO88890 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh2d1aO88890 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Sh2d1aO88890 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh2d1aO88890 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.16□□□□□ -0.46
Sh2d1aO88890 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.16□□□□□ -0.46
Sh2d1aO88890 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sh2d1aO88890 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sh2d1aO88890 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms