Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.75■□□□□ 0.27
Cacna1hO88427 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.74■□□□□ 0.27
Cacna1hO88427 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Cacna1hO88427 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.74■□□□□ 0.27
Cacna1hO88427 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1hO88427 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.74■□□□□ 0.27
Cacna1hO88427 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1hO88427 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cacna1hO88427 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cacna1hO88427 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1hO88427 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1hO88427 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1hO88427 Gm23547-201ENSMUST00000158210 271 ntBASIC16.74■□□□□ 0.27
Cacna1hO88427 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1hO88427 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1hO88427 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.74■□□□□ 0.27
Cacna1hO88427 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1hO88427 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1hO88427 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1hO88427 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1hO88427 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1hO88427 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cacna1hO88427 Gm27000-201ENSMUST00000182943 842 ntBASIC16.73■□□□□ 0.27
Cacna1hO88427 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1hO88427 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cacna1hO88427 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1hO88427 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1hO88427 Gm15173-201ENSMUST00000122049 433 ntBASIC16.73■□□□□ 0.27
Cacna1hO88427 Gm6550-201ENSMUST00000187574 993 ntBASIC16.73■□□□□ 0.27
Cacna1hO88427 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Cacna1hO88427 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.73■□□□□ 0.27
Cacna1hO88427 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.73■□□□□ 0.27
Cacna1hO88427 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1hO88427 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cacna1hO88427 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cacna1hO88427 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.72■□□□□ 0.27
Cacna1hO88427 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.72■□□□□ 0.27
Cacna1hO88427 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.72■□□□□ 0.27
Cacna1hO88427 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.72■□□□□ 0.27
Cacna1hO88427 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cacna1hO88427 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cacna1hO88427 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cacna1hO88427 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cacna1hO88427 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cacna1hO88427 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cacna1hO88427 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cacna1hO88427 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.71■□□□□ 0.27
Cacna1hO88427 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cacna1hO88427 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cacna1hO88427 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cacna1hO88427 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cacna1hO88427 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.71■□□□□ 0.27
Cacna1hO88427 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cacna1hO88427 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cacna1hO88427 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cacna1hO88427 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
Cacna1hO88427 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cacna1hO88427 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Cacna1hO88427 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cacna1hO88427 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Cacna1hO88427 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cacna1hO88427 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Cacna1hO88427 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 AA543401-201ENSMUST00000164248 1269 ntBASIC16.7■□□□□ 0.26
Cacna1hO88427 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.7■□□□□ 0.26
Cacna1hO88427 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.7■□□□□ 0.26
Cacna1hO88427 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.7■□□□□ 0.26
Cacna1hO88427 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Cacna1hO88427 Mir6956-201ENSMUST00000183598 62 ntBASIC16.7■□□□□ 0.26
Cacna1hO88427 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cacna1hO88427 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.7■□□□□ 0.26
Cacna1hO88427 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms