Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tgfbr3O88393 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.33■□□□□ 0.21
Tgfbr3O88393 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tgfbr3O88393 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Tgfbr3O88393 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Tgfbr3O88393 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Tgfbr3O88393 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tgfbr3O88393 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tgfbr3O88393 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfbr3O88393 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.31■□□□□ 0.2
Tgfbr3O88393 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tgfbr3O88393 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Gm34391-201ENSMUST00000203706 907 ntBASIC16.3■□□□□ 0.2
Tgfbr3O88393 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.3■□□□□ 0.2
Tgfbr3O88393 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Tgfbr3O88393 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tgfbr3O88393 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.29■□□□□ 0.2
Tgfbr3O88393 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Gm15794-201ENSMUST00000120182 631 ntBASIC16.29■□□□□ 0.2
Tgfbr3O88393 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.29■□□□□ 0.2
Tgfbr3O88393 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms