Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10226O88253 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10226O88253 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10226O88253 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Gm10226O88253 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.28□□□□□ -0.28
Gm10226O88253 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10226O88253 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10226O88253 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm10226O88253 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm10226O88253 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Gm10226O88253 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Gm10226O88253 Gm22697-201ENSMUST00000175194 63 ntBASIC13.27□□□□□ -0.29
Gm10226O88253 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Gm7213-201ENSMUST00000215977 950 ntBASIC13.27□□□□□ -0.29
Gm10226O88253 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm10226O88253 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm10226O88253 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.26□□□□□ -0.29
Gm10226O88253 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm10226O88253 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.26□□□□□ -0.29
Gm10226O88253 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm10226O88253 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm10226O88253 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Gm10226O88253 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm10226O88253 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm10226O88253 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm10226O88253 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Gm10226O88253 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm10226O88253 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Gm10226O88253 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.25□□□□□ -0.29
Gm10226O88253 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.25□□□□□ -0.29
Gm10226O88253 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Gm10226O88253 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.25□□□□□ -0.29
Gm10226O88253 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm10226O88253 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Gm27000-201ENSMUST00000182943 842 ntBASIC13.25□□□□□ -0.29
Gm10226O88253 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.25□□□□□ -0.29
Gm10226O88253 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Gm10226O88253 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm10226O88253 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm10226O88253 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm10226O88253 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm10226O88253 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm10226O88253 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Gm10226O88253 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm10226O88253 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm10226O88253 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm10226O88253 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.24□□□□□ -0.29
Gm10226O88253 Gm6659-201ENSMUST00000174752 547 ntBASIC13.24□□□□□ -0.29
Gm10226O88253 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.24□□□□□ -0.29
Gm10226O88253 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Gm10226O88253 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm10226O88253 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms