Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ldb2O55203 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb2O55203 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb2O55203 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb2O55203 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb2O55203 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb2O55203 Mir5122-201ENSMUST00000175004 89 ntBASIC17.11■□□□□ 0.33
Ldb2O55203 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb2O55203 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.11■□□□□ 0.33
Ldb2O55203 Odf3b-204ENSMUST00000227834 930 ntBASIC17.11■□□□□ 0.33
Ldb2O55203 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb2O55203 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb2O55203 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ldb2O55203 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Ldb2O55203 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ldb2O55203 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ldb2O55203 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Gm7638-201ENSMUST00000121348 967 ntBASIC17.1■□□□□ 0.33
Ldb2O55203 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.1■□□□□ 0.33
Ldb2O55203 Gm21814-202ENSMUST00000203277 873 ntBASIC17.1■□□□□ 0.33
Ldb2O55203 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb2O55203 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ldb2O55203 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Ldb2O55203 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb2O55203 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb2O55203 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb2O55203 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ldb2O55203 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb2O55203 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.09■□□□□ 0.33
Ldb2O55203 Gm3375-201ENSMUST00000203929 796 ntBASIC17.09■□□□□ 0.33
Ldb2O55203 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.09■□□□□ 0.33
Ldb2O55203 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ldb2O55203 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb2O55203 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb2O55203 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb2O55203 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.09■□□□□ 0.33
Ldb2O55203 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb2O55203 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb2O55203 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb2O55203 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ldb2O55203 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ldb2O55203 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ldb2O55203 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ldb2O55203 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ldb2O55203 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.08■□□□□ 0.33
Ldb2O55203 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ldb2O55203 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.08■□□□□ 0.32
Ldb2O55203 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ldb2O55203 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ldb2O55203 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ldb2O55203 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.08■□□□□ 0.32
Ldb2O55203 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.08■□□□□ 0.32
Ldb2O55203 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.08■□□□□ 0.32
Ldb2O55203 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.08■□□□□ 0.32
Ldb2O55203 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ldb2O55203 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ldb2O55203 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.08■□□□□ 0.32
Ldb2O55203 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Ldb2O55203 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ldb2O55203 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ldb2O55203 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb2O55203 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ldb2O55203 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb2O55203 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.07■□□□□ 0.32
Ldb2O55203 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb2O55203 Gm9731-201ENSMUST00000209480 747 ntBASIC17.07■□□□□ 0.32
Ldb2O55203 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.07■□□□□ 0.32
Ldb2O55203 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb2O55203 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb2O55203 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.07■□□□□ 0.32
Ldb2O55203 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb2O55203 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb2O55203 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb2O55203 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb2O55203 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb2O55203 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb2O55203 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb2O55203 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb2O55203 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ldb2O55203 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ldb2O55203 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb2O55203 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Ldb2O55203 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb2O55203 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms