Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.83□□□□□ -0.36
Rpl35aO55142 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.83□□□□□ -0.36
Rpl35aO55142 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rpl35aO55142 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Rpl35aO55142 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.83□□□□□ -0.36
Rpl35aO55142 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.83□□□□□ -0.36
Rpl35aO55142 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.83□□□□□ -0.36
Rpl35aO55142 Gm4974-201ENSMUST00000209974 875 ntBASIC12.83□□□□□ -0.36
Rpl35aO55142 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.83□□□□□ -0.36
Rpl35aO55142 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rpl35aO55142 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rpl35aO55142 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpl35aO55142 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Rpl35aO55142 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Rpl35aO55142 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpl35aO55142 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Gm15565-201ENSMUST00000118890 427 ntBASIC12.82□□□□□ -0.36
Rpl35aO55142 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rpl35aO55142 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpl35aO55142 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.82□□□□□ -0.36
Rpl35aO55142 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rpl35aO55142 Rarb-207ENSMUST00000225921 2756 ntBASIC12.82□□□□□ -0.36
Rpl35aO55142 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rpl35aO55142 Idnk-204ENSMUST00000226010 1898 ntBASIC12.82□□□□□ -0.36
Rpl35aO55142 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpl35aO55142 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Rpl35aO55142 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Rpl35aO55142 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Rpl35aO55142 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Rpl35aO55142 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.81□□□□□ -0.36
Rpl35aO55142 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.81□□□□□ -0.36
Rpl35aO55142 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rpl35aO55142 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.81□□□□□ -0.36
Rpl35aO55142 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.81□□□□□ -0.36
Rpl35aO55142 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rpl35aO55142 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rpl35aO55142 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rpl35aO55142 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpl35aO55142 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpl35aO55142 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rpl35aO55142 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.8□□□□□ -0.36
Rpl35aO55142 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Rpl35aO55142 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpl35aO55142 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms