Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Copb2O55029 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Copb2O55029 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Copb2O55029 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Copb2O55029 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Copb2O55029 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Copb2O55029 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.76■□□□□ 0.75
Copb2O55029 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Copb2O55029 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Copb2O55029 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Copb2O55029 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Copb2O55029 Gm27389-201ENSMUST00000183622 195 ntBASIC19.76■□□□□ 0.75
Copb2O55029 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Copb2O55029 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Copb2O55029 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.76■□□□□ 0.75
Copb2O55029 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Copb2O55029 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Copb2O55029 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Copb2O55029 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Copb2O55029 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Copb2O55029 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.75■□□□□ 0.75
Copb2O55029 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Copb2O55029 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.75■□□□□ 0.75
Copb2O55029 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.75■□□□□ 0.75
Copb2O55029 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.75■□□□□ 0.75
Copb2O55029 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Copb2O55029 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Copb2O55029 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Copb2O55029 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Copb2O55029 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Copb2O55029 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
Copb2O55029 Mir1668-201ENSMUST00000184114 107 ntBASIC19.75■□□□□ 0.75
Copb2O55029 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.75■□□□□ 0.75
Copb2O55029 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Copb2O55029 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Copb2O55029 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Copb2O55029 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Copb2O55029 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Copb2O55029 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Copb2O55029 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Copb2O55029 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Copb2O55029 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Copb2O55029 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.74■□□□□ 0.75
Copb2O55029 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Copb2O55029 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.74■□□□□ 0.75
Copb2O55029 Gm33142-201ENSMUST00000193913 867 ntBASIC19.74■□□□□ 0.75
Copb2O55029 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Copb2O55029 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.74■□□□□ 0.75
Copb2O55029 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Copb2O55029 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Copb2O55029 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Copb2O55029 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Copb2O55029 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Copb2O55029 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Copb2O55029 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Copb2O55029 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Copb2O55029 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Copb2O55029 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.73■□□□□ 0.75
Copb2O55029 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Copb2O55029 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.73■□□□□ 0.75
Copb2O55029 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Copb2O55029 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.73■□□□□ 0.75
Copb2O55029 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Copb2O55029 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Copb2O55029 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Copb2O55029 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Copb2O55029 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Copb2O55029 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.72■□□□□ 0.75
Copb2O55029 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.72■□□□□ 0.75
Copb2O55029 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.72■□□□□ 0.75
Copb2O55029 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.72■□□□□ 0.75
Copb2O55029 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.72■□□□□ 0.75
Copb2O55029 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Copb2O55029 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Copb2O55029 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Copb2O55029 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Copb2O55029 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Copb2O55029 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Copb2O55029 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Copb2O55029 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.72■□□□□ 0.75
Copb2O55029 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.71■□□□□ 0.75
Copb2O55029 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.71■□□□□ 0.75
Copb2O55029 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Copb2O55029 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Copb2O55029 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Copb2O55029 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Copb2O55029 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms