Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prom1O54990 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prom1O54990 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prom1O54990 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prom1O54990 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prom1O54990 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prom1O54990 Gm24589-201ENSMUST00000116692 94 ntBASIC18.97■□□□□ 0.63
Prom1O54990 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prom1O54990 Gm27000-201ENSMUST00000182943 842 ntBASIC18.97■□□□□ 0.63
Prom1O54990 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.97■□□□□ 0.63
Prom1O54990 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prom1O54990 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prom1O54990 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prom1O54990 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prom1O54990 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prom1O54990 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Prom1O54990 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prom1O54990 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prom1O54990 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prom1O54990 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prom1O54990 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prom1O54990 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.96■□□□□ 0.63
Prom1O54990 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.96■□□□□ 0.63
Prom1O54990 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prom1O54990 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prom1O54990 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prom1O54990 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Prom1O54990 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prom1O54990 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prom1O54990 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.96■□□□□ 0.63
Prom1O54990 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prom1O54990 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prom1O54990 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prom1O54990 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prom1O54990 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prom1O54990 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prom1O54990 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Prom1O54990 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Prom1O54990 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prom1O54990 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.95■□□□□ 0.62
Prom1O54990 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prom1O54990 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prom1O54990 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Prom1O54990 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prom1O54990 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prom1O54990 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Prom1O54990 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prom1O54990 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
Prom1O54990 Gm15794-201ENSMUST00000120182 631 ntBASIC18.94■□□□□ 0.62
Prom1O54990 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prom1O54990 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.94■□□□□ 0.62
Prom1O54990 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Prom1O54990 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prom1O54990 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.94■□□□□ 0.62
Prom1O54990 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.94■□□□□ 0.62
Prom1O54990 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prom1O54990 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prom1O54990 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prom1O54990 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prom1O54990 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Prom1O54990 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.94■□□□□ 0.62
Prom1O54990 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prom1O54990 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Prom1O54990 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.93■□□□□ 0.62
Prom1O54990 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prom1O54990 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prom1O54990 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prom1O54990 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prom1O54990 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prom1O54990 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prom1O54990 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.93■□□□□ 0.62
Prom1O54990 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Prom1O54990 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Prom1O54990 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.93■□□□□ 0.62
Prom1O54990 Gm34391-201ENSMUST00000203706 907 ntBASIC18.93■□□□□ 0.62
Prom1O54990 Gm18115-201ENSMUST00000221209 621 ntBASIC18.93■□□□□ 0.62
Prom1O54990 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Prom1O54990 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Prom1O54990 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prom1O54990 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prom1O54990 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prom1O54990 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.93■□□□□ 0.62
Prom1O54990 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prom1O54990 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prom1O54990 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prom1O54990 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prom1O54990 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prom1O54990 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prom1O54990 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prom1O54990 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Prom1O54990 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.92■□□□□ 0.62
Prom1O54990 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prom1O54990 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.92■□□□□ 0.62
Prom1O54990 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.92■□□□□ 0.62
Prom1O54990 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.92■□□□□ 0.62
Prom1O54990 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prom1O54990 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prom1O54990 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prom1O54990 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms