Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptlc1O35704 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.8■□□□□ 0.6
Sptlc1O35704 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptlc1O35704 Gm11950-201ENSMUST00000121615 838 ntBASIC18.8■□□□□ 0.6
Sptlc1O35704 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Sptlc1O35704 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptlc1O35704 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptlc1O35704 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptlc1O35704 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptlc1O35704 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sptlc1O35704 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptlc1O35704 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptlc1O35704 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sptlc1O35704 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sptlc1O35704 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sptlc1O35704 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.79■□□□□ 0.6
Sptlc1O35704 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sptlc1O35704 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.79■□□□□ 0.6
Sptlc1O35704 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Sptlc1O35704 Gm28033-201ENSMUST00000184224 96 ntBASIC18.79■□□□□ 0.6
Sptlc1O35704 Gm37722-201ENSMUST00000193757 208 ntBASIC18.79■□□□□ 0.6
Sptlc1O35704 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.79■□□□□ 0.6
Sptlc1O35704 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sptlc1O35704 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sptlc1O35704 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptlc1O35704 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptlc1O35704 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptlc1O35704 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sptlc1O35704 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptlc1O35704 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.78■□□□□ 0.6
Sptlc1O35704 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.78■□□□□ 0.6
Sptlc1O35704 Gm17971-201ENSMUST00000190239 806 ntBASIC18.78■□□□□ 0.6
Sptlc1O35704 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sptlc1O35704 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.78■□□□□ 0.6
Sptlc1O35704 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptlc1O35704 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptlc1O35704 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptlc1O35704 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sptlc1O35704 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptlc1O35704 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptlc1O35704 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sptlc1O35704 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sptlc1O35704 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sptlc1O35704 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sptlc1O35704 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sptlc1O35704 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.77■□□□□ 0.6
Sptlc1O35704 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sptlc1O35704 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Sptlc1O35704 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.77■□□□□ 0.6
Sptlc1O35704 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.77■□□□□ 0.6
Sptlc1O35704 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sptlc1O35704 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Sptlc1O35704 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sptlc1O35704 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sptlc1O35704 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sptlc1O35704 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.77■□□□□ 0.6
Sptlc1O35704 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sptlc1O35704 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sptlc1O35704 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sptlc1O35704 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sptlc1O35704 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.77■□□□□ 0.59
Sptlc1O35704 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sptlc1O35704 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sptlc1O35704 Gm17807-201ENSMUST00000186869 298 ntBASIC18.76■□□□□ 0.59
Sptlc1O35704 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Sptlc1O35704 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sptlc1O35704 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptlc1O35704 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.76■□□□□ 0.59
Sptlc1O35704 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.76■□□□□ 0.59
Sptlc1O35704 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sptlc1O35704 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms