Protein–RNA interactions for Protein: O35646

Capn6, Calpain-6, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn6O35646 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Capn6O35646 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Capn6O35646 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Capn6O35646 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Capn6O35646 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn6O35646 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Capn6O35646 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Capn6O35646 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn6O35646 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Capn6O35646 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Capn6O35646 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Capn6O35646 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn6O35646 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn6O35646 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn6O35646 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Capn6O35646 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.54■□□□□ 0.4
Capn6O35646 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn6O35646 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Capn6O35646 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn6O35646 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Capn6O35646 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Capn6O35646 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.54■□□□□ 0.4
Capn6O35646 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn6O35646 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Capn6O35646 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn6O35646 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Capn6O35646 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.54■□□□□ 0.4
Capn6O35646 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Capn6O35646 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Capn6O35646 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.53■□□□□ 0.4
Capn6O35646 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Gm11249-201ENSMUST00000117071 859 ntBASIC17.53■□□□□ 0.4
Capn6O35646 Gm12896-201ENSMUST00000118430 226 ntBASIC17.53■□□□□ 0.4
Capn6O35646 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.53■□□□□ 0.4
Capn6O35646 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.53■□□□□ 0.4
Capn6O35646 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Capn6O35646 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Capn6O35646 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capn6O35646 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capn6O35646 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.52■□□□□ 0.4
Capn6O35646 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.52■□□□□ 0.4
Capn6O35646 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Capn6O35646 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Capn6O35646 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.52■□□□□ 0.4
Capn6O35646 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.52■□□□□ 0.4
Capn6O35646 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.52■□□□□ 0.4
Capn6O35646 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.52■□□□□ 0.4
Capn6O35646 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Capn6O35646 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.52■□□□□ 0.4
Capn6O35646 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Capn6O35646 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Capn6O35646 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.52■□□□□ 0.39
Capn6O35646 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Capn6O35646 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Capn6O35646 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Capn6O35646 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.52■□□□□ 0.39
Capn6O35646 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Capn6O35646 Gm13216-201ENSMUST00000117145 591 ntBASIC17.51■□□□□ 0.39
Capn6O35646 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.51■□□□□ 0.39
Capn6O35646 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.51■□□□□ 0.39
Capn6O35646 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Capn6O35646 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capn6O35646 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Capn6O35646 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.5■□□□□ 0.39
Capn6O35646 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capn6O35646 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Capn6O35646 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Capn6O35646 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms