Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp3O35609 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp3O35609 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp3O35609 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp3O35609 Gm10418-201ENSMUST00000100943 576 ntBASIC17.14■□□□□ 0.33
Scamp3O35609 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Scamp3O35609 Gm38027-201ENSMUST00000192315 235 ntBASIC17.14■□□□□ 0.33
Scamp3O35609 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp3O35609 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp3O35609 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp3O35609 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp3O35609 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp3O35609 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scamp3O35609 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Scamp3O35609 Gm13559-201ENSMUST00000120476 863 ntBASIC17.13■□□□□ 0.33
Scamp3O35609 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Scamp3O35609 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Scamp3O35609 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp3O35609 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scamp3O35609 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scamp3O35609 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scamp3O35609 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.12■□□□□ 0.33
Scamp3O35609 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scamp3O35609 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.11■□□□□ 0.33
Scamp3O35609 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.11■□□□□ 0.33
Scamp3O35609 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.11■□□□□ 0.33
Scamp3O35609 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Gm24841-201ENSMUST00000158676 357 ntBASIC17.11■□□□□ 0.33
Scamp3O35609 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scamp3O35609 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scamp3O35609 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scamp3O35609 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.1■□□□□ 0.33
Scamp3O35609 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scamp3O35609 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.1■□□□□ 0.33
Scamp3O35609 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scamp3O35609 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.1■□□□□ 0.33
Scamp3O35609 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.1■□□□□ 0.33
Scamp3O35609 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms