Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Npc1O35604 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Npc1O35604 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.8■□□□□ 0.28
Npc1O35604 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Npc1O35604 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Npc1O35604 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Npc1O35604 Gm13836-201ENSMUST00000121159 501 ntBASIC16.8■□□□□ 0.28
Npc1O35604 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.8■□□□□ 0.28
Npc1O35604 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.8■□□□□ 0.28
Npc1O35604 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.8■□□□□ 0.28
Npc1O35604 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.8■□□□□ 0.28
Npc1O35604 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Npc1O35604 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Npc1O35604 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Npc1O35604 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.79■□□□□ 0.28
Npc1O35604 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Npc1O35604 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.79■□□□□ 0.28
Npc1O35604 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.79■□□□□ 0.28
Npc1O35604 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.79■□□□□ 0.28
Npc1O35604 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Npc1O35604 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.79■□□□□ 0.28
Npc1O35604 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Npc1O35604 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Npc1O35604 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.79■□□□□ 0.28
Npc1O35604 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Npc1O35604 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Npc1O35604 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Npc1O35604 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Npc1O35604 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.79■□□□□ 0.28
Npc1O35604 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npc1O35604 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Npc1O35604 Gm12085-201ENSMUST00000119263 940 ntBASIC16.78■□□□□ 0.28
Npc1O35604 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.78■□□□□ 0.28
Npc1O35604 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Npc1O35604 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npc1O35604 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npc1O35604 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npc1O35604 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npc1O35604 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Npc1O35604 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npc1O35604 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npc1O35604 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Npc1O35604 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.77■□□□□ 0.28
Npc1O35604 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npc1O35604 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Npc1O35604 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npc1O35604 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npc1O35604 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npc1O35604 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.77■□□□□ 0.28
Npc1O35604 Gm24841-201ENSMUST00000158676 357 ntBASIC16.77■□□□□ 0.28
Npc1O35604 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Npc1O35604 Gm43799-201ENSMUST00000201845 579 ntBASIC16.77■□□□□ 0.28
Npc1O35604 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Npc1O35604 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npc1O35604 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Npc1O35604 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Npc1O35604 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Npc1O35604 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Npc1O35604 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Npc1O35604 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Npc1O35604 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Npc1O35604 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Npc1O35604 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Npc1O35604 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Npc1O35604 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.76■□□□□ 0.27
Npc1O35604 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.76■□□□□ 0.27
Npc1O35604 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.76■□□□□ 0.27
Npc1O35604 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Npc1O35604 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms