Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca4O35600 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca4O35600 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca4O35600 Gm15173-201ENSMUST00000122049 433 ntBASIC16.17■□□□□ 0.18
Abca4O35600 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.17■□□□□ 0.18
Abca4O35600 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Abca4O35600 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Abca4O35600 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.17■□□□□ 0.18
Abca4O35600 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca4O35600 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca4O35600 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.17■□□□□ 0.18
Abca4O35600 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Abca4O35600 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Abca4O35600 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Abca4O35600 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.16■□□□□ 0.18
Abca4O35600 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.16■□□□□ 0.18
Abca4O35600 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.16■□□□□ 0.18
Abca4O35600 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 Gm15590-201ENSMUST00000078419 552 ntBASIC16.16■□□□□ 0.18
Abca4O35600 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Abca4O35600 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Abca4O35600 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.16■□□□□ 0.18
Abca4O35600 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.16■□□□□ 0.18
Abca4O35600 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.16■□□□□ 0.18
Abca4O35600 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Abca4O35600 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abca4O35600 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.15■□□□□ 0.18
Abca4O35600 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Abca4O35600 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abca4O35600 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.15■□□□□ 0.18
Abca4O35600 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abca4O35600 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Abca4O35600 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Abca4O35600 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Abca4O35600 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Abca4O35600 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Abca4O35600 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Abca4O35600 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.14■□□□□ 0.18
Abca4O35600 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Abca4O35600 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.14■□□□□ 0.18
Abca4O35600 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Abca4O35600 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Abca4O35600 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Abca4O35600 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Abca4O35600 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Abca4O35600 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Abca4O35600 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.14■□□□□ 0.17
Abca4O35600 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.14■□□□□ 0.17
Abca4O35600 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.14■□□□□ 0.17
Abca4O35600 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Abca4O35600 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Abca4O35600 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Abca4O35600 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Abca4O35600 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Abca4O35600 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Abca4O35600 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abca4O35600 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abca4O35600 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abca4O35600 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.13■□□□□ 0.17
Abca4O35600 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abca4O35600 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abca4O35600 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Abca4O35600 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abca4O35600 Gm11424-201ENSMUST00000121929 829 ntBASIC16.13■□□□□ 0.17
Abca4O35600 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.13■□□□□ 0.17
Abca4O35600 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Abca4O35600 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.13■□□□□ 0.17
Abca4O35600 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Abca4O35600 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abca4O35600 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Abca4O35600 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Abca4O35600 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abca4O35600 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abca4O35600 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.12■□□□□ 0.17
Abca4O35600 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Abca4O35600 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms