Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stx1aO35526 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stx1aO35526 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Stx1aO35526 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Stx1aO35526 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.37■□□□□ 0.69
Stx1aO35526 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.37■□□□□ 0.69
Stx1aO35526 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.37■□□□□ 0.69
Stx1aO35526 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stx1aO35526 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Stx1aO35526 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Stx1aO35526 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stx1aO35526 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stx1aO35526 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stx1aO35526 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Stx1aO35526 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.37■□□□□ 0.69
Stx1aO35526 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stx1aO35526 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Stx1aO35526 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stx1aO35526 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stx1aO35526 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Stx1aO35526 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stx1aO35526 Gm11927-201ENSMUST00000118472 759 ntBASIC19.36■□□□□ 0.69
Stx1aO35526 Gm26524-201ENSMUST00000192339 390 ntBASIC19.36■□□□□ 0.69
Stx1aO35526 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stx1aO35526 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.36■□□□□ 0.69
Stx1aO35526 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Stx1aO35526 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stx1aO35526 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stx1aO35526 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stx1aO35526 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stx1aO35526 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stx1aO35526 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Stx1aO35526 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stx1aO35526 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stx1aO35526 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stx1aO35526 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stx1aO35526 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Stx1aO35526 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Stx1aO35526 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stx1aO35526 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stx1aO35526 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.35■□□□□ 0.69
Stx1aO35526 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Stx1aO35526 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stx1aO35526 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stx1aO35526 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.35■□□□□ 0.69
Stx1aO35526 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stx1aO35526 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Stx1aO35526 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Stx1aO35526 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stx1aO35526 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Stx1aO35526 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Stx1aO35526 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.34■□□□□ 0.69
Stx1aO35526 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Stx1aO35526 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stx1aO35526 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Stx1aO35526 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Stx1aO35526 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.34■□□□□ 0.69
Stx1aO35526 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stx1aO35526 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Stx1aO35526 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Stx1aO35526 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Stx1aO35526 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Stx1aO35526 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Stx1aO35526 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stx1aO35526 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stx1aO35526 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stx1aO35526 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Stx1aO35526 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stx1aO35526 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stx1aO35526 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Stx1aO35526 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Stx1aO35526 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Stx1aO35526 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Stx1aO35526 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.33■□□□□ 0.69
Stx1aO35526 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Stx1aO35526 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stx1aO35526 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stx1aO35526 Gm11643-201ENSMUST00000119578 864 ntBASIC19.33■□□□□ 0.68
Stx1aO35526 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Stx1aO35526 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stx1aO35526 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stx1aO35526 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stx1aO35526 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Stx1aO35526 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stx1aO35526 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Stx1aO35526 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stx1aO35526 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stx1aO35526 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stx1aO35526 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stx1aO35526 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.32■□□□□ 0.68
Stx1aO35526 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stx1aO35526 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.32■□□□□ 0.68
Stx1aO35526 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stx1aO35526 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.32■□□□□ 0.68
Stx1aO35526 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stx1aO35526 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Stx1aO35526 Mtag2-201ENSMUST00000058665 714 ntBASIC19.32■□□□□ 0.68
Stx1aO35526 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Stx1aO35526 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stx1aO35526 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms