Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.17■□□□□ 0.18
Cx3cl1O35188 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cx3cl1O35188 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cx3cl1O35188 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.15■□□□□ 0.18
Cx3cl1O35188 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.15■□□□□ 0.18
Cx3cl1O35188 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Gm38027-201ENSMUST00000192315 235 ntBASIC16.15■□□□□ 0.18
Cx3cl1O35188 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cx3cl1O35188 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cx3cl1O35188 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cx3cl1O35188 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Cx3cl1O35188 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cl1O35188 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.13■□□□□ 0.17
Cx3cl1O35188 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cl1O35188 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Gm8969-201ENSMUST00000199694 526 ntBASIC16.12■□□□□ 0.17
Cx3cl1O35188 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.12■□□□□ 0.17
Cx3cl1O35188 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms