Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Gfra3O35118 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Gfra3O35118 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.89□□□□□ -0.03
Gfra3O35118 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.89□□□□□ -0.03
Gfra3O35118 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Gfra3O35118 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gfra3O35118 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gfra3O35118 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Gfra3O35118 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gfra3O35118 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gfra3O35118 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gfra3O35118 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gfra3O35118 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Gfra3O35118 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gfra3O35118 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Gfra3O35118 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Gfra3O35118 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gfra3O35118 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gfra3O35118 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Gfra3O35118 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gfra3O35118 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Gfra3O35118 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gfra3O35118 Gm7977-201ENSMUST00000193787 748 ntBASIC14.88□□□□□ -0.03
Gfra3O35118 Gm37025-201ENSMUST00000195159 829 ntBASIC14.88□□□□□ -0.03
Gfra3O35118 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Gfra3O35118 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Gfra3O35118 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gfra3O35118 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.88□□□□□ -0.03
Gfra3O35118 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gfra3O35118 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gfra3O35118 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gfra3O35118 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.88□□□□□ -0.03
Gfra3O35118 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Gfra3O35118 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gfra3O35118 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gfra3O35118 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Gfra3O35118 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.87□□□□□ -0.03
Gfra3O35118 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Gfra3O35118 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.87□□□□□ -0.03
Gfra3O35118 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.87□□□□□ -0.03
Gfra3O35118 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.87□□□□□ -0.03
Gfra3O35118 Gm18959-201ENSMUST00000208954 655 ntBASIC14.87□□□□□ -0.03
Gfra3O35118 Gm9731-201ENSMUST00000209480 747 ntBASIC14.87□□□□□ -0.03
Gfra3O35118 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.87□□□□□ -0.03
Gfra3O35118 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Gfra3O35118 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.87□□□□□ -0.03
Gfra3O35118 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.87□□□□□ -0.03
Gfra3O35118 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gfra3O35118 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Gfra3O35118 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Gfra3O35118 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Gm2274-201ENSMUST00000184539 609 ntBASIC14.86□□□□□ -0.03
Gfra3O35118 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Gfra3O35118 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Gfra3O35118 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.86□□□□□ -0.03
Gfra3O35118 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Gfra3O35118 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gfra3O35118 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gfra3O35118 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.85□□□□□ -0.03
Gfra3O35118 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gfra3O35118 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.85□□□□□ -0.03
Gfra3O35118 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gfra3O35118 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gfra3O35118 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gfra3O35118 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Gfra3O35118 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gfra3O35118 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gfra3O35118 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.85□□□□□ -0.03
Gfra3O35118 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.85□□□□□ -0.03
Gfra3O35118 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gfra3O35118 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gfra3O35118 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gfra3O35118 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gfra3O35118 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gfra3O35118 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms