Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.5■□□□□ 0.87
Hdac1O09106 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac1O09106 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac1O09106 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac1O09106 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Hdac1O09106 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hdac1O09106 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac1O09106 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac1O09106 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hdac1O09106 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac1O09106 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac1O09106 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac1O09106 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.49■□□□□ 0.87
Hdac1O09106 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.49■□□□□ 0.87
Hdac1O09106 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.49■□□□□ 0.87
Hdac1O09106 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac1O09106 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac1O09106 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hdac1O09106 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac1O09106 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac1O09106 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac1O09106 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac1O09106 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hdac1O09106 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac1O09106 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac1O09106 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac1O09106 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac1O09106 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac1O09106 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac1O09106 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac1O09106 Gm27405-201ENSMUST00000184201 112 ntBASIC20.48■□□□□ 0.87
Hdac1O09106 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.48■□□□□ 0.87
Hdac1O09106 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.48■□□□□ 0.87
Hdac1O09106 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac1O09106 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Hdac1O09106 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hdac1O09106 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac1O09106 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac1O09106 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac1O09106 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac1O09106 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Hdac1O09106 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hdac1O09106 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac1O09106 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac1O09106 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac1O09106 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac1O09106 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.47■□□□□ 0.87
Hdac1O09106 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac1O09106 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac1O09106 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac1O09106 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac1O09106 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac1O09106 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac1O09106 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Hdac1O09106 Dancr-204ENSMUST00000132389 2347 ntBASIC20.46■□□□□ 0.87
Hdac1O09106 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac1O09106 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.46■□□□□ 0.87
Hdac1O09106 Gm11249-201ENSMUST00000117071 859 ntBASIC20.46■□□□□ 0.87
Hdac1O09106 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac1O09106 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac1O09106 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac1O09106 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac1O09106 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.46■□□□□ 0.87
Hdac1O09106 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac1O09106 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac1O09106 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Hdac1O09106 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Hdac1O09106 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Hdac1O09106 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac1O09106 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac1O09106 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac1O09106 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Hdac1O09106 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.44■□□□□ 0.86
Hdac1O09106 Gm5408-201ENSMUST00000197998 747 ntBASIC20.44■□□□□ 0.86
Hdac1O09106 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac1O09106 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac1O09106 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac1O09106 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac1O09106 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac1O09106 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac1O09106 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Hdac1O09106 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Hdac1O09106 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Hdac1O09106 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac1O09106 Gm12933-201ENSMUST00000120203 872 ntBASIC20.43■□□□□ 0.86
Hdac1O09106 Gm8495-201ENSMUST00000188740 694 ntBASIC20.43■□□□□ 0.86
Hdac1O09106 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms