Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.62■□□□□ 0.57
Ube3aO08759 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.62■□□□□ 0.57
Ube3aO08759 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.62■□□□□ 0.57
Ube3aO08759 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ube3aO08759 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube3aO08759 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ube3aO08759 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ube3aO08759 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3aO08759 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.61■□□□□ 0.57
Ube3aO08759 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3aO08759 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3aO08759 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3aO08759 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.61■□□□□ 0.57
Ube3aO08759 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.61■□□□□ 0.57
Ube3aO08759 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.61■□□□□ 0.57
Ube3aO08759 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3aO08759 Gm10602-201ENSMUST00000098239 609 ntBASIC18.61■□□□□ 0.57
Ube3aO08759 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3aO08759 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3aO08759 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3aO08759 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ube3aO08759 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3aO08759 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube3aO08759 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3aO08759 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3aO08759 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.6■□□□□ 0.57
Ube3aO08759 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ube3aO08759 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ube3aO08759 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
Ube3aO08759 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ube3aO08759 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3aO08759 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.6■□□□□ 0.57
Ube3aO08759 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3aO08759 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.6■□□□□ 0.57
Ube3aO08759 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3aO08759 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3aO08759 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.6■□□□□ 0.57
Ube3aO08759 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3aO08759 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3aO08759 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3aO08759 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3aO08759 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3aO08759 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ube3aO08759 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube3aO08759 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3aO08759 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3aO08759 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3aO08759 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3aO08759 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3aO08759 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3aO08759 Mir2861-201ENSMUST00000175539 82 ntBASIC18.59■□□□□ 0.57
Ube3aO08759 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.59■□□□□ 0.57
Ube3aO08759 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3aO08759 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube3aO08759 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ube3aO08759 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Ube3aO08759 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ube3aO08759 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ube3aO08759 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Ube3aO08759 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ube3aO08759 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube3aO08759 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube3aO08759 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ube3aO08759 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.58■□□□□ 0.56
Ube3aO08759 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube3aO08759 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.58■□□□□ 0.56
Ube3aO08759 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.58■□□□□ 0.56
Ube3aO08759 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube3aO08759 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Ube3aO08759 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube3aO08759 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ube3aO08759 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube3aO08759 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube3aO08759 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ube3aO08759 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ube3aO08759 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube3aO08759 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ube3aO08759 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube3aO08759 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube3aO08759 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube3aO08759 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ube3aO08759 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ube3aO08759 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
Ube3aO08759 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube3aO08759 Gm13401-201ENSMUST00000117074 291 ntBASIC18.57■□□□□ 0.56
Ube3aO08759 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ube3aO08759 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.57■□□□□ 0.56
Ube3aO08759 Gm6365-201ENSMUST00000054711 744 ntBASIC18.57■□□□□ 0.56
Ube3aO08759 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube3aO08759 Flg-201ENSMUST00000050758 1488 ntBASIC18.57■□□□□ 0.56
Ube3aO08759 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube3aO08759 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms