Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Raet1aO08602 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Raet1aO08602 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Raet1aO08602 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Raet1aO08602 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.25■□□□□ 0.03
Raet1aO08602 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Raet1aO08602 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1aO08602 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1aO08602 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1aO08602 Gm27011-201ENSMUST00000182352 972 ntBASIC15.24■□□□□ 0.03
Raet1aO08602 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1aO08602 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.24■□□□□ 0.03
Raet1aO08602 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1aO08602 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.24■□□□□ 0.03
Raet1aO08602 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.24■□□□□ 0.03
Raet1aO08602 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1aO08602 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1aO08602 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Raet1aO08602 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Raet1aO08602 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Raet1aO08602 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Raet1aO08602 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1aO08602 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.23■□□□□ 0.03
Raet1aO08602 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.23■□□□□ 0.03
Raet1aO08602 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1aO08602 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.23■□□□□ 0.03
Raet1aO08602 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1aO08602 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1aO08602 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.23■□□□□ 0.03
Raet1aO08602 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1aO08602 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1aO08602 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.23■□□□□ 0.03
Raet1aO08602 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1aO08602 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1aO08602 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1aO08602 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Raet1aO08602 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Raet1aO08602 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Raet1aO08602 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Raet1aO08602 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1aO08602 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1aO08602 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1aO08602 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1aO08602 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1aO08602 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1aO08602 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Raet1aO08602 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.22■□□□□ 0.03
Raet1aO08602 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.22■□□□□ 0.03
Raet1aO08602 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.22■□□□□ 0.03
Raet1aO08602 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.22■□□□□ 0.03
Raet1aO08602 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1aO08602 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Raet1aO08602 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1aO08602 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.22■□□□□ 0.03
Raet1aO08602 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1aO08602 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1aO08602 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Raet1aO08602 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1aO08602 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Raet1aO08602 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1aO08602 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1aO08602 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1aO08602 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1aO08602 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1aO08602 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1aO08602 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1aO08602 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1aO08602 Mir1199-201ENSMUST00000117015 119 ntBASIC15.21■□□□□ 0.03
Raet1aO08602 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.21■□□□□ 0.03
Raet1aO08602 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.21■□□□□ 0.03
Raet1aO08602 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1aO08602 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1aO08602 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Raet1aO08602 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.21■□□□□ 0.03
Raet1aO08602 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Raet1aO08602 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.21■□□□□ 0.02
Raet1aO08602 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Raet1aO08602 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms