Protein–RNA interactions for Protein: O08529

Capn2, Calpain-2 catalytic subunit, mousemouse

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn2O08529 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capn2O08529 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Capn2O08529 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capn2O08529 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Capn2O08529 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Capn2O08529 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.34■□□□□ 0.69
Capn2O08529 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Capn2O08529 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Capn2O08529 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Capn2O08529 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Capn2O08529 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Capn2O08529 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Capn2O08529 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Capn2O08529 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.33■□□□□ 0.68
Capn2O08529 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Capn2O08529 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.33■□□□□ 0.68
Capn2O08529 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Capn2O08529 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Capn2O08529 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Capn2O08529 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Capn2O08529 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.33■□□□□ 0.68
Capn2O08529 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn2O08529 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn2O08529 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Capn2O08529 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Capn2O08529 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn2O08529 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn2O08529 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Capn2O08529 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.32■□□□□ 0.68
Capn2O08529 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Capn2O08529 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn2O08529 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn2O08529 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.32■□□□□ 0.68
Capn2O08529 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn2O08529 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn2O08529 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn2O08529 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn2O08529 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.32■□□□□ 0.68
Capn2O08529 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Capn2O08529 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Capn2O08529 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.32■□□□□ 0.68
Capn2O08529 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capn2O08529 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capn2O08529 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capn2O08529 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capn2O08529 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Capn2O08529 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Capn2O08529 Ank2-226ENSMUST00000189368 339 ntBASIC19.31■□□□□ 0.68
Capn2O08529 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capn2O08529 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.31■□□□□ 0.68
Capn2O08529 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capn2O08529 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Capn2O08529 Dancr-204ENSMUST00000132389 2347 ntBASIC19.3■□□□□ 0.68
Capn2O08529 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Capn2O08529 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capn2O08529 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Capn2O08529 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Capn2O08529 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capn2O08529 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capn2O08529 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Capn2O08529 Mir5130-201ENSMUST00000175160 84 ntBASIC19.3■□□□□ 0.68
Capn2O08529 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.3■□□□□ 0.68
Capn2O08529 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Capn2O08529 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Capn2O08529 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capn2O08529 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Capn2O08529 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capn2O08529 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capn2O08529 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capn2O08529 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capn2O08529 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Capn2O08529 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capn2O08529 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capn2O08529 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capn2O08529 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Capn2O08529 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capn2O08529 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Capn2O08529 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capn2O08529 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Capn2O08529 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capn2O08529 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.29■□□□□ 0.68
Capn2O08529 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capn2O08529 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Capn2O08529 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capn2O08529 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Capn2O08529 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capn2O08529 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capn2O08529 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capn2O08529 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.28■□□□□ 0.68
Capn2O08529 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.28■□□□□ 0.68
Capn2O08529 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capn2O08529 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capn2O08529 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capn2O08529 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capn2O08529 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.28■□□□□ 0.68
Capn2O08529 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.28■□□□□ 0.68
Capn2O08529 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capn2O08529 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Capn2O08529 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capn2O08529 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms