Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Chrna9G3X8Z7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna9G3X8Z7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Chrna9G3X8Z7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna9G3X8Z7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna9G3X8Z7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chrna9G3X8Z7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna9G3X8Z7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna9G3X8Z7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Chrna9G3X8Z7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna9G3X8Z7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Chrna9G3X8Z7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna9G3X8Z7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna9G3X8Z7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.46■□□□□ 0.55
Chrna9G3X8Z7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna9G3X8Z7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna9G3X8Z7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna9G3X8Z7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna9G3X8Z7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna9G3X8Z7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Chrna9G3X8Z7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna9G3X8Z7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Gm37025-201ENSMUST00000195159 829 ntBASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna9G3X8Z7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms