Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NpcdF8VQB8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NpcdF8VQB8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NpcdF8VQB8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NpcdF8VQB8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.64■□□□□ 0.89
NpcdF8VQB8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NpcdF8VQB8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NpcdF8VQB8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NpcdF8VQB8 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.64■□□□□ 0.89
NpcdF8VQB8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.64■□□□□ 0.89
NpcdF8VQB8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NpcdF8VQB8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.64■□□□□ 0.89
NpcdF8VQB8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NpcdF8VQB8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NpcdF8VQB8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Gm1401-201ENSMUST00000122048 772 ntBASIC20.63■□□□□ 0.89
NpcdF8VQB8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.63■□□□□ 0.89
NpcdF8VQB8 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.63■□□□□ 0.89
NpcdF8VQB8 Rps4l-201ENSMUST00000071745 943 ntBASIC20.63■□□□□ 0.89
NpcdF8VQB8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NpcdF8VQB8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NpcdF8VQB8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NpcdF8VQB8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NpcdF8VQB8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
NpcdF8VQB8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.6■□□□□ 0.89
NpcdF8VQB8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.6■□□□□ 0.89
NpcdF8VQB8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.6■□□□□ 0.89
NpcdF8VQB8 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.6■□□□□ 0.89
NpcdF8VQB8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NpcdF8VQB8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NpcdF8VQB8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NpcdF8VQB8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
NpcdF8VQB8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NpcdF8VQB8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NpcdF8VQB8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NpcdF8VQB8 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.6■□□□□ 0.89
NpcdF8VQB8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Gm8000-201ENSMUST00000188378 592 ntBASIC20.59■□□□□ 0.89
NpcdF8VQB8 Gm2213-201ENSMUST00000197485 688 ntBASIC20.59■□□□□ 0.89
NpcdF8VQB8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NpcdF8VQB8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms