Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.27■□□□□ 0.36
Col6a3E9PWQ3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Col6a3E9PWQ3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col6a3E9PWQ3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col6a3E9PWQ3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col6a3E9PWQ3 Gm11764-201ENSMUST00000120221 623 ntBASIC17.27■□□□□ 0.36
Col6a3E9PWQ3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.27■□□□□ 0.36
Col6a3E9PWQ3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col6a3E9PWQ3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col6a3E9PWQ3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Col6a3E9PWQ3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Col6a3E9PWQ3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.27■□□□□ 0.35
Col6a3E9PWQ3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Col6a3E9PWQ3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col6a3E9PWQ3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col6a3E9PWQ3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a3E9PWQ3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.26■□□□□ 0.35
Col6a3E9PWQ3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Col6a3E9PWQ3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a3E9PWQ3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Col6a3E9PWQ3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a3E9PWQ3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a3E9PWQ3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.26■□□□□ 0.35
Col6a3E9PWQ3 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.26■□□□□ 0.35
Col6a3E9PWQ3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col6a3E9PWQ3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col6a3E9PWQ3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col6a3E9PWQ3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col6a3E9PWQ3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms