Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 AC160338.1-201ENSMUST00000214232 705 ntBASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
Hfm1D3Z4R1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Hfm1D3Z4R1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC24.17■■□□□ 1.46
Hfm1D3Z4R1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Hfm1D3Z4R1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Hfm1D3Z4R1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Hfm1D3Z4R1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Hfm1D3Z4R1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Hfm1D3Z4R1 Gm13830-205ENSMUST00000201195 1155 ntBASIC24.17■■□□□ 1.46
Hfm1D3Z4R1 Gm18421-201ENSMUST00000204122 625 ntBASIC24.17■■□□□ 1.46
Hfm1D3Z4R1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Hfm1D3Z4R1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Hfm1D3Z4R1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Hfm1D3Z4R1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Hfm1D3Z4R1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Hfm1D3Z4R1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Hfm1D3Z4R1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Hfm1D3Z4R1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Hfm1D3Z4R1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Hfm1D3Z4R1 Gm6376-201ENSMUST00000209407 580 ntBASIC24.16■■□□□ 1.46
Hfm1D3Z4R1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
Hfm1D3Z4R1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Hfm1D3Z4R1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24.16■■□□□ 1.46
Hfm1D3Z4R1 Gm6627-201ENSMUST00000218299 2386 ntBASIC24.16■■□□□ 1.46
Hfm1D3Z4R1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Hfm1D3Z4R1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Hfm1D3Z4R1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC24.15■■□□□ 1.46
Hfm1D3Z4R1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Hfm1D3Z4R1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Hfm1D3Z4R1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Hfm1D3Z4R1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Hfm1D3Z4R1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Hfm1D3Z4R1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Hfm1D3Z4R1 Gm15165-201ENSMUST00000118140 502 ntBASIC24.14■■□□□ 1.45
Hfm1D3Z4R1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Hfm1D3Z4R1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Hfm1D3Z4R1 Gm27867-201ENSMUST00000184778 125 ntBASIC24.14■■□□□ 1.45
Hfm1D3Z4R1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Hfm1D3Z4R1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC24.14■■□□□ 1.45
Hfm1D3Z4R1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Hfm1D3Z4R1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Hfm1D3Z4R1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Hfm1D3Z4R1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Hfm1D3Z4R1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Gm10060-201ENSMUST00000212002 111 ntBASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Hfm1D3Z4R1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Gm8000-201ENSMUST00000188378 592 ntBASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hfm1D3Z4R1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 Mir5126-201ENSMUST00000175513 77 ntBASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 Gm43332-201ENSMUST00000202511 1044 ntBASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC24.11■■□□□ 1.45
Hfm1D3Z4R1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms