Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syce3B5KM66 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syce3B5KM66 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.75■□□□□ 0.75
Syce3B5KM66 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.75■□□□□ 0.75
Syce3B5KM66 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Syce3B5KM66 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.75■□□□□ 0.75
Syce3B5KM66 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syce3B5KM66 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.75■□□□□ 0.75
Syce3B5KM66 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syce3B5KM66 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Syce3B5KM66 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Syce3B5KM66 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Syce3B5KM66 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Syce3B5KM66 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.74■□□□□ 0.75
Syce3B5KM66 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syce3B5KM66 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syce3B5KM66 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Syce3B5KM66 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syce3B5KM66 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syce3B5KM66 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syce3B5KM66 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.73■□□□□ 0.75
Syce3B5KM66 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Syce3B5KM66 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syce3B5KM66 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.73■□□□□ 0.75
Syce3B5KM66 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Syce3B5KM66 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syce3B5KM66 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syce3B5KM66 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syce3B5KM66 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.73■□□□□ 0.75
Syce3B5KM66 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syce3B5KM66 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syce3B5KM66 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syce3B5KM66 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syce3B5KM66 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Syce3B5KM66 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syce3B5KM66 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syce3B5KM66 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Syce3B5KM66 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Syce3B5KM66 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.72■□□□□ 0.75
Syce3B5KM66 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Syce3B5KM66 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syce3B5KM66 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.72■□□□□ 0.75
Syce3B5KM66 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syce3B5KM66 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Syce3B5KM66 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.71■□□□□ 0.75
Syce3B5KM66 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Syce3B5KM66 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Syce3B5KM66 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Syce3B5KM66 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Syce3B5KM66 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syce3B5KM66 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syce3B5KM66 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syce3B5KM66 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Syce3B5KM66 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syce3B5KM66 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syce3B5KM66 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.7■□□□□ 0.74
Syce3B5KM66 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.7■□□□□ 0.74
Syce3B5KM66 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syce3B5KM66 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Syce3B5KM66 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Syce3B5KM66 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syce3B5KM66 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syce3B5KM66 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Syce3B5KM66 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syce3B5KM66 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syce3B5KM66 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syce3B5KM66 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syce3B5KM66 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Syce3B5KM66 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms