Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Gm25925-201ENSMUST00000158314 306 ntBASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usf3B2RUQ2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usf3B2RUQ2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usf3B2RUQ2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Usf3B2RUQ2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Usf3B2RUQ2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usf3B2RUQ2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Gm3375-201ENSMUST00000203929 796 ntBASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usf3B2RUQ2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Gm6345-202ENSMUST00000180900 204 ntBASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.31□□□□□ -0.12
Usf3B2RUQ2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms