Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Gm5640A3KG49 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.51■□□□□ 0.39
Gm5640A3KG49 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5640A3KG49 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5640A3KG49 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gm5640A3KG49 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5640A3KG49 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gm5640A3KG49 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Gm43060-201ENSMUST00000200621 289 ntBASIC17.49■□□□□ 0.39
Gm5640A3KG49 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Gm9988-201ENSMUST00000069786 435 ntBASIC17.49■□□□□ 0.39
Gm5640A3KG49 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5640A3KG49 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5640A3KG49 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5640A3KG49 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5640A3KG49 Reep4-203ENSMUST00000226563 1444 ntBASIC17.48■□□□□ 0.39
Gm5640A3KG49 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5640A3KG49 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Gm5640A3KG49 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5640A3KG49 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5640A3KG49 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.48■□□□□ 0.39
Gm5640A3KG49 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5640A3KG49 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5640A3KG49 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm5640A3KG49 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.47■□□□□ 0.39
Gm5640A3KG49 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm5640A3KG49 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm5640A3KG49 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.46■□□□□ 0.39
Gm5640A3KG49 Gm10418-201ENSMUST00000100943 576 ntBASIC17.46■□□□□ 0.39
Gm5640A3KG49 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm5640A3KG49 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm5640A3KG49 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms