Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 AC154757.1-201ENSMUST00000228289 336 ntBASIC9.1□□□□□ -0.95
Ubr4A2AN08 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Gm13036-201ENSMUST00000117799 748 ntBASIC9.09□□□□□ -0.95
Ubr4A2AN08 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 AC126028.2-201ENSMUST00000228100 1833 ntBASIC9.09□□□□□ -0.95
Ubr4A2AN08 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ubr4A2AN08 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC9.09□□□□□ -0.95
Ubr4A2AN08 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ubr4A2AN08 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Gm11764-201ENSMUST00000120221 623 ntBASIC9.08□□□□□ -0.96
Ubr4A2AN08 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Tgds-204ENSMUST00000228543 1594 ntBASIC9.08□□□□□ -0.96
Ubr4A2AN08 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Gm13829-201ENSMUST00000119600 138 ntBASIC9.08□□□□□ -0.96
Ubr4A2AN08 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Gm12176-201ENSMUST00000121420 875 ntBASIC9.08□□□□□ -0.96
Ubr4A2AN08 Thap2-203ENSMUST00000218989 527 ntBASIC9.08□□□□□ -0.96
Ubr4A2AN08 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC9.08□□□□□ -0.96
Ubr4A2AN08 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ubr4A2AN08 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC9.07□□□□□ -0.96
Ubr4A2AN08 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Ubr4A2AN08 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ubr4A2AN08 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC9.07□□□□□ -0.96
Ubr4A2AN08 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ubr4A2AN08 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ubr4A2AN08 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ubr4A2AN08 AC174742.1-201ENSMUST00000218272 304 ntBASIC9.07□□□□□ -0.96
Ubr4A2AN08 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ubr4A2AN08 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ubr4A2AN08 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ubr4A2AN08 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms