Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3854A0A1B0GSS6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3854A0A1B0GSS6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3854A0A1B0GSS6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3854A0A1B0GSS6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Gm7153-201ENSMUST00000117092 455 ntBASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Gm27742-201ENSMUST00000184667 60 ntBASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.23■□□□□ 0.35
Gm3854A0A1B0GSS6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Mir8112-201ENSMUST00000184382 131 ntBASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm3854A0A1B0GSS6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Gm3854A0A1B0GSS6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Gm3854A0A1B0GSS6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm3854A0A1B0GSS6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3854A0A1B0GSS6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3854A0A1B0GSS6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Gm3854A0A1B0GSS6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3854A0A1B0GSS6 Gm45328-201ENSMUST00000210942 917 ntBASIC17.19■□□□□ 0.34
Gm3854A0A1B0GSS6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Gm3854A0A1B0GSS6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3854A0A1B0GSS6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.19■□□□□ 0.34
Gm3854A0A1B0GSS6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3854A0A1B0GSS6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3854A0A1B0GSS6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm3854A0A1B0GSS6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Gm3854A0A1B0GSS6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms