Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 AC099934.2-201ENSMUST00000196389 70 ntBASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 AC156953.1-201ENSMUST00000196953 70 ntBASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 AC157822.2-201ENSMUST00000200291 70 ntBASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Igkv1-88A0A140T8N1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Igkv1-88A0A140T8N1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Igkv1-88A0A140T8N1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Igkv1-88A0A140T8N1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Igkv1-88A0A140T8N1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Igkv1-88A0A140T8N1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Igkv1-88A0A140T8N1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Igkv1-88A0A140T8N1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Igkv1-88A0A140T8N1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Igkv1-88A0A140T8N1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Igkv1-88A0A140T8N1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Igkv1-88A0A140T8N1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Igkv1-88A0A140T8N1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Gm7514-201ENSMUST00000209475 934 ntBASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igkv1-88A0A140T8N1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Gm18671-201ENSMUST00000214826 683 ntBASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igkv1-88A0A140T8N1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Igkv1-88A0A140T8N1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms