Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cfap99A0A140LIX9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cfap99A0A140LIX9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cfap99A0A140LIX9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cfap99A0A140LIX9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.57■□□□□ 0.88
Cfap99A0A140LIX9 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.57■□□□□ 0.88
Cfap99A0A140LIX9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cfap99A0A140LIX9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cfap99A0A140LIX9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cfap99A0A140LIX9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 Gm27741-201ENSMUST00000185060 237 ntBASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cfap99A0A140LIX9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Gm22697-201ENSMUST00000175194 63 ntBASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Idnk-204ENSMUST00000226010 1898 ntBASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfap99A0A140LIX9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cfap99A0A140LIX9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cfap99A0A140LIX9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.54■□□□□ 0.88
Cfap99A0A140LIX9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cfap99A0A140LIX9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cfap99A0A140LIX9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cfap99A0A140LIX9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Cfap99A0A140LIX9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.54■□□□□ 0.88
Cfap99A0A140LIX9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cfap99A0A140LIX9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Gm4974-201ENSMUST00000209974 875 ntBASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfap99A0A140LIX9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cfap99A0A140LIX9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cfap99A0A140LIX9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cfap99A0A140LIX9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cfap99A0A140LIX9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cfap99A0A140LIX9 Gm14859-201ENSMUST00000117752 357 ntBASIC20.52■□□□□ 0.88
Cfap99A0A140LIX9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cfap99A0A140LIX9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cfap99A0A140LIX9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cfap99A0A140LIX9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.52■□□□□ 0.88
Cfap99A0A140LIX9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Cfap99A0A140LIX9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.52■□□□□ 0.87
Cfap99A0A140LIX9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Cfap99A0A140LIX9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Cfap99A0A140LIX9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cfap99A0A140LIX9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfap99A0A140LIX9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms