Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc194A0A140LIT1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc194A0A140LIT1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc194A0A140LIT1 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc194A0A140LIT1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Gm6576-201ENSMUST00000169678 883 ntBASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc194A0A140LIT1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Gm11249-201ENSMUST00000117071 859 ntBASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Gm13158-201ENSMUST00000122007 736 ntBASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms